Pure speculation but I have noticed that the 2500 and up cells have a high self-discharge rate, low current capacity and higher voltage sag under high loads VS lower capacity cells.
Knowing that to make a higher capacity cell involves making the seperator thinner, there could be (probably is) higher current leakage through the seperator. This would explain why they self-discharge much faster and have a lower current capacity than the lower total capacity cells.
Another oddity I have noted is a huge self-discharge rate on lithium-ion cells. I have been using a Milwaukee 28V lithium-ion powered drill for the last year and the Molicell high current (10C+) batteries will self discharge 50% in two weeks.
Tested a year-old PowerEx 2500 with the Sanyo HR stamp on the cell at a 2.5 amp charge/discharge rate (1C) and for three cycles it tested 8%, 8% and 7% capacity down to 1.00V. At a discharge limit of 1.08V, it gave a capacity of 2% Dropped the charge/discharge rate to 1.25 amps (0.5C) and the first cycle gave 78% so I let the Cadex continue as it will constantly cycle until the batteries return a 50% capacity.
I have tested 12V 1 amp hour defibrillator batteries at a 1C charge/discharge rate and they sit at well over 100% of their capacity...even after several years of use. Spiked a defib battery (blasted it with 30V and 5 amps for a second) to "wake it up" as it was stored dead for 5 years and the battery was 7 years old. Cycled it a few times and it was back over 100% capacity at 1C charge/discharge rate.
Since I have been stuck testing medical batteries for the last 20 years, be it lead acid 144V mega packs, SLA, AGM lead acid, Gel Cell, NiMH, NiCd, Lithium-ion and Lithium-Polymer... the most rugged by far is NiCad. Lead Acid is #2 for ruggedness, amp capacity and longevity. AGM and SLA is in the middle with NiMH & Gel Cell underperforming. Lithium based batteries have low self discharge but only last a few years and have a low amp discharge capacity (Except the new Molicell and A123 System drill batteries)
The A123 System nano-technology LiFePO4 batteries hold promise and we are checking them out with DeWalt 36V drills, circular saws, sawzalls and yes... the flashlight (POS that it is) They do self-discharge about the same rate as NiMH but can throw 30 amps from a 2300mAH cell. They should have a 5+ year life as long as you don't let them sit on a DeWalt charge too long. The DeWalt charger will overcharge the cells since most DeWalt chargers tend to do that. Thanks DeWalt... $159 batteries
Oh yeah, those "36 volt" batteries are NOT true 36 volts... more like 32 volts nominal since their are ten of them in series and LiFePO4 is nominally 32 volts under load.
It has been my experience that NiCad, normal lead-acid and lower capacity NiMH hold up better than the other battery types. The LiFePO4 batteries hold promise to finally bring lithium based rechargables above the low ampacity, couple of years use and dumpster time chemistry. As far as defibrillators go, NiCad is the most common battery followed by sealed lead-acid to handle the high current loads. The AED type defibs use lithium-primary cells so rechargables are not in that equation.
For normal flashlight, camera, MP3 player and wireless computer accessories... I am switching to Eneloop 2000mAH batteries. I'll gladly give up some fresh off the charger runtime for more durability, better voltage stability under high current discharge and much improved self-discharge rates.