You could label your batteries to keep track of them (Sharpie) and then rotate all of them through your normal usage cycle. Eneloops manage quite well in storage, but they still benefit from a bit of use to keep them fresh.The thing is, in Canada Duraloops cost $15 per four, but twice a year our drugstore puts them on sale for $6.99. I bought like 10 packs to make sure I have them when I need them, but now comes the question of cycling.
...If you always draining them below 1v especially in high drain devices won't that count as a full cycle when charged??
You may want to consider storing the cells with a 'Partial Charge'. Per a post from SilverFox, I've been using 25% for my 'Storage Box Queens':...I like to store my 'extra' Eneloops in the refrigerator, in a ziplock bag, after discharging them to 0.9 volts with a MH-C9000 charger. Then once a month, or sometimes every two months, I take four out of the frig, let them warm to room temp while still in the ziplock bag. I charge them, let them rest about two hours, and discharge them again. (And record the information in a spread sheet.) Once this is done, they go back the ziplock and back into the refrigerator...